Ore_g29938 (XTH17, ATXTH17)

Aliases : XTH17, ATXTH17

Description : EC_2.4 glycosyltransferase & original description: none

Gene families : OG0000079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g29938
Cluster	HCCA: Cluster_159

Target	Alias	Description	ECC score	Gene Family Method
AT4G37800	XTH7	xyloglucan endotransglucosylase/hydrolase 7	0.03	OrthoFinder output from all 47 species
Ala_g23154	XTH5, EXGT-A4	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g09125	XTH9	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g05668	XTH5, EXGT-A4	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.23G057800.1	XTH5, EXGT-A4,...	EC_2.4 glycosyltransferase & original description:...	0.04	OrthoFinder output from all 47 species
Ehy_g19314	XTH6	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01003280001	XTH1	Putative xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species
Gb_22329	XTH9	Xyloglucan endotransglucosylase/hydrolase protein 9...	0.03	OrthoFinder output from all 47 species
Gb_30162	XTH7	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species
LOC_Os04g51450.1	XTR3, XTH25,...	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	OrthoFinder output from all 47 species
Solyc07g006850.3.1	XTR3, XTH25,...	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species
Zm00001e038619_P002	Zm00001e038619	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEA	Interproscan
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
CC	GO:0048046	apoplast	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006334	nucleosome assembly	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
CC	GO:0032993	protein-DNA complex	IEP	HCCA
BP	GO:0034728	nucleosome organization	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
CC	GO:0044815	DNA packaging complex	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0065004	protein-DNA complex assembly	IEP	HCCA
BP	GO:0071824	protein-DNA complex subunit organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000757	GH16	47	225
IPR010713	XET_C	269	296

External Links

No external refs found!