1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g29365

Ore_g29365 (ASHR3, SDG4)


Aliases : ASHR3, SDG4

Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0001934 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001934_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g29365
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene63096.t1 Aspi01Gene63096 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G008000.1 ASHR3, SDG4,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dcu_g18639 ASHH3, SDG7 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
GSVIVT01023699001 ASHR3, SDG4 Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
Mp1g06040.1 ASHR3, SDG4 class II/ASH1 histone methyltransferase component of... 0.01 OrthoFinder output from all 47 species
Mp6g20020.1 ASHR3, SDG4 class II/ASH1 histone methyltransferase component of... 0.02 OrthoFinder output from all 47 species
Nbi_g03125 ASHR3, SDG4 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Sam_g13585 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Solyc01g006220.3.1 ASHH3, SDG7,... class II/ASH1 histone methyltransferase component of... 0.06 OrthoFinder output from all 47 species
Spa_g39004 ASHH3, SDG7 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Spa_g52643 ASHR3, SDG4 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 675 780
No external refs found!