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  5. Ore_g29326

Ore_g29326 (LGT1, GAUT1)


Aliases : LGT1, GAUT1

Description : component *(GAUT1) of GAUT1:GAUT7 galacturonosyltransferase complex & original description: none


Gene families : OG0000136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g29326
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00115p00091320 LGT6, GAUT12,... Probable galacturonosyltransferase 12 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g061055 LGT1, GAUT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11551 LGT1, GAUT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08263 LGT1, GAUT1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011500001 GAUT14 Probable galacturonosyltransferase 13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_11702 GAUT13 Probable galacturonosyltransferase 13 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os10g21890.2 GAUT3, LOC_Os10g21890 Probable galacturonosyltransferase 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10429440g0010 GAUT11 Probable galacturonosyltransferase 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp1g23600.1 GAUT11 Probable galacturonosyltransferase 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g04939 LGT1, GAUT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09071 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Pir_g15036 LGT4, GAUT10 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g25102 LGT1, GAUT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12327 LGT1, GAUT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0225.g026314 LGT4, GAUT10 not classified & original description: CDS=92-1690 0.02 OrthoFinder output from all 47 species
Tin_g10785 LGT1, GAUT1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013325_P003 GAUT3, Zm00001e013325 Probable galacturonosyltransferase 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e038254_P001 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034975 protein folding in endoplasmic reticulum IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 385 699
No external refs found!