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  5. Ore_g28851

Ore_g28851


Description : not classified & original description: none


Gene families : OG0000712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g28851

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00072820 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G29350 No alias Kinase-related protein of unknown function (DUF1296) 0.03 OrthoFinder output from all 47 species
AT1G29370 No alias Kinase-related protein of unknown function (DUF1296) 0.02 OrthoFinder output from all 47 species
Adi_g008163 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g025128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g053981 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g061004 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087204 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g120900 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g129391 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g05517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02771 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11975 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g29441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15326 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g26977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G033400.1 Ceric.02G033400 not classified & original description: pacid=50584302... 0.06 OrthoFinder output from all 47 species
Ceric.27G004200.1 Ceric.27G004200 not classified & original description: pacid=50604818... 0.03 OrthoFinder output from all 47 species
Ceric.29G083800.1 Ceric.29G083800 not classified & original description: pacid=50624429... 0.04 OrthoFinder output from all 47 species
Dac_g07091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g18699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15721 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19941 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01021389001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01030121001 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_00263 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_30926 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os01g47430.1 LOC_Os01g47430 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g08670.1 LOC_Os09g08670 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g03459 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11160 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_137710g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_768428g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g06750.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g26326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13051 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g18048 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0181.g024848 No alias not classified & original description: CDS=93-2615 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0233.g026486 No alias not classified & original description: CDS=154-2919 0.03 OrthoFinder output from all 47 species
Sam_g13683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo438753 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc02g071180.3.1 Solyc02g071180 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc03g005750.3.1 Solyc03g005750 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g045230.4.1 Solyc07g045230 GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g065745.1.1 Solyc07g065745 GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g08817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026550_P001 Zm00001e026550 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e028004_P001 Zm00001e028004 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR009719 GIP1_N 17 73
No external refs found!