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  5. Ore_g28699

Ore_g28699


Description : not classified & original description: none


Gene families : OG0006143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g28699

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00203340 evm_27.TU.AmTr_v1... GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
AT5G66470 No alias RNA binding;GTP binding 0.03 OrthoFinder output from all 47 species
Adi_g012500 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g22081 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g12785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g19160 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g10735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009893 No alias not classified & original description: CDS=1-903 0.04 OrthoFinder output from all 47 species
Ceric.25G026200.1 Ceric.25G026200 not classified & original description: pacid=50594372... 0.03 OrthoFinder output from all 47 species
Dcu_g01237 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g10149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01221 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01018924001 No alias GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_05092 No alias GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os05g49220.1 LOC_Os05g49220 GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Mp2g20310.1 No alias GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Msp_g10494 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g01964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01274 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07554 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g11943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo75698 No alias GTPase ERA1, chloroplastic OS=Zea mays 0.03 OrthoFinder output from all 47 species
Solyc02g077280.4.1 Solyc02g077280 GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g10099 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15511 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
InterPro domains Description Start Stop
IPR006073 GTP-bd 114 231
IPR004044 KH_dom_type_2 315 392
No external refs found!