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  5. Ore_g27885

Ore_g27885


Description : not classified & original description: none


Gene families : OG0001550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001550_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g27885

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00144610 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
AMTR_s00088p00164330 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
AT4G27240 No alias zinc finger (C2H2 type) family protein 0.03 OrthoFinder output from all 47 species
Aev_g05450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16934.t1 Aspi01Gene16934 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29956.t1 Aspi01Gene29956 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008925001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
LOC_Os01g57650.1 LOC_Os01g57650 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os04g59380.1 LOC_Os04g59380 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os11g06840.1 LOC_Os11g06840 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Nbi_g13834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g00634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo236040 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
Smo268776 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Solyc07g063970.3.1 Solyc07g063970 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e008786_P002 Zm00001e008786 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e019606_P002 Zm00001e019606 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!