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  5. Ore_g26207

Ore_g26207


Description : not classified & original description: none


Gene families : OG0000510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g26207
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Ala_g01899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47030.t1 Aspi01Gene47030 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G046200.1 Ceric.28G046200 not classified & original description: pacid=50570096... 0.04 OrthoFinder output from all 47 species
Dcu_g07501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06870 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g30300.1 LOC_Os02g30300 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g31610.1 LOC_Os04g31610 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g29710.1 LOC_Os11g29710 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g01626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g21990.1 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g07796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02374 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g25528 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013455 No alias not classified & original description: CDS=833-2278 0.02 OrthoFinder output from all 47 species
Tin_g04573 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e008387_P001 Zm00001e008387 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002893 Znf_MYND 317 358
IPR001810 F-box_dom 38 79
IPR006597 Sel1-like 152 185
IPR006597 Sel1-like 187 216
No external refs found!