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  5. Ore_g25943

Ore_g25943 (WLIM1)


Aliases : WLIM1

Description : LIM-type transcription factor & original description: none


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g25943
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT3G61230 No alias GATA type zinc finger transcription factor family protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene53056.t1 Aspi01Gene53056 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04896 No alias LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10082 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04716 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g21254 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39776 No alias regulatory protein *(HY5) of UV-B signal transduction &... 0.03 OrthoFinder output from all 47 species
Ore_g19519 WLIM1 LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004357 glutamate-cysteine ligase activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 134 189
IPR001781 Znf_LIM 35 89
No external refs found!