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  5. Ore_g25621

Ore_g25621


Description : not classified & original description: none


Gene families : OG0000627 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000627_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g25621

Target Alias Description ECC score Gene Family Method Actions
Aev_g42686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g58788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04338.t2 Aspi01Gene04338 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31898 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g03310.1 LOC_Os08g03310 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Len_g37038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_479847g0010 No alias C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Smo439924 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
Zm00001e001546_P001 Zm00001e001546 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e020869_P004 Zm00001e020869 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e035876_P001 Zm00001e035876 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e038256_P001 Zm00001e038256 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 202 223
IPR025605 OST-HTH/LOTUS_dom 247 324
IPR000504 RRM_dom 363 408
IPR018957 Znf_C3HC4_RING-type 625 663
No external refs found!