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  5. Ore_g25388

Ore_g25388


Description : non-SNARE-type phytolongin & original description: none


Gene families : OG0001363 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001363_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g25388
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Aop_g01603 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14564 No alias non-SNARE-type phytolongin & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29996 No alias non-SNARE-type phytolongin & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03533 No alias non-SNARE-type phytolongin & original description: none 0.02 OrthoFinder output from all 47 species
Len_g12391 No alias non-SNARE-type phytolongin & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04173 No alias non-SNARE-type phytolongin & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04276 No alias non-SNARE-type phytolongin & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011873 No alias non-SNARE-type phytolongin & original description: CDS=1-1005 0.03 OrthoFinder output from all 47 species
Zm00001e029159_P001 Zm00001e029159 non-SNARE-type phytolongin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 38 95
No external refs found!