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  5. Ore_g24250

Ore_g24250


Description : not classified & original description: none


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g24250
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00210890 evm_27.TU.AmTr_v1... Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00214870 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 23... 0.03 OrthoFinder output from all 47 species
AT1G71050 HIPP20 Heavy metal transport/detoxification superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G24450 No alias Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G56240 CCH copper chaperone 0.03 OrthoFinder output from all 47 species
Ala_g16301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70762 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G003200.1 Ceric.07G003200 not classified & original description: pacid=50628015... 0.03 OrthoFinder output from all 47 species
Ceric.24G019500.1 Ceric.24G019500 not classified & original description: pacid=50629311... 0.02 OrthoFinder output from all 47 species
Ceric.32G005700.1 Ceric.32G005700 not classified & original description: pacid=50598369... 0.03 OrthoFinder output from all 47 species
Dcu_g39890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030883001 HIPP21 Heavy metal-associated isoprenylated plant protein 21... 0.05 OrthoFinder output from all 47 species
Gb_20921 No alias Heavy metal-associated isoprenylated plant protein 23... 0.02 OrthoFinder output from all 47 species
Gb_33825 No alias copper chaperone (CCH) 0.03 OrthoFinder output from all 47 species
MA_150983g0010 No alias Heavy metal-associated isoprenylated plant protein 26... 0.04 OrthoFinder output from all 47 species
MA_8226951g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9120066g0010 No alias Heavy metal-associated isoprenylated plant protein 45... 0.03 OrthoFinder output from all 47 species
Pir_g03590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c14_1600V3.1 Pp3c14_1600 Heavy metal transport/detoxification superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g09848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011436 No alias not classified & original description: CDS=202-840 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018364 No alias not classified & original description: CDS=311-727 0.02 OrthoFinder output from all 47 species
Solyc11g073020.3.1 Solyc11g073020 Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g25571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25572 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54496 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009740_P001 Zm00001e009740 Heavy metal-associated isoprenylated plant protein 23... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 8 62
No external refs found!