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  5. Aev_g16826

Aev_g16826


Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g16826
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00266060 SAMDC,... Polyamine... 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00109640 SAMDC,... Polyamine... 0.04 OrthoFinder output from all 47 species
Cba_g03355 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15212 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.34G041400.1 SAMDC, Ceric.34G041400 EC_4.1 carbon-carbon lyase & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g19187 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os09g37120.1 LOC_Os09g37120 ornithine decarboxylase 0.03 OrthoFinder output from all 47 species
Len_g07243 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429775g0030 No alias S-adenosyl methionine decarboxylase 0.04 OrthoFinder output from all 47 species
MA_123449g0010 No alias S-adenosyl methionine decarboxylase 0.02 OrthoFinder output from all 47 species
Mp1g22070.1 No alias ornithine decarboxylase. S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
Mp7g18100.1 No alias S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
Nbi_g07578 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17324 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g082030.1.1 Solyc04g082030 ornithine decarboxylase 0.04 OrthoFinder output from all 47 species
Solyc06g054460.1.1 SAMDC4, BUD2,... S-adenosyl methionine decarboxylase 0.04 OrthoFinder output from all 47 species
Spa_g50329 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011219_P001 Zm00001e011219 ornithine decarboxylase 0.03 OrthoFinder output from all 47 species
Zm00001e035959_P001 Zm00001e035959 ornithine decarboxylase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001985 S-AdoMet_decarboxylase 19 349
IPR022644 De-COase2_N 448 661
No external refs found!