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  5. Aev_g16780

Aev_g16780 (GMD2, MUR1, MUR_1)


Aliases : GMD2, MUR1, MUR_1

Description : EC_4.2 carbon-oxygen lyase & original description: none


Gene families : OG0001979 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001979_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g16780

Target Alias Description ECC score Gene Family Method Actions
AT5G66280 GMD1 GDP-D-mannose 4,6-dehydratase 1 0.04 OrthoFinder output from all 47 species
Ala_g01453 GMD2, MUR1, MUR_1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07516.t1 GMD1, Aspi01Gene07516 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G056900.1 GMD1, Ceric.34G056900 EC_4.2 carbon-oxygen lyase & original description:... 0.03 OrthoFinder output from all 47 species
Mp1g09600.1 GMD2, MUR1, MUR_1 GDP-D-mannose 4,6-dehydratase (MUR1) 0.03 OrthoFinder output from all 47 species
Mp1g09610.1 GMD2, MUR1, MUR_1 GDP-D-mannose 4,6-dehydratase (MUR1) 0.02 OrthoFinder output from all 47 species
Mp2g21830.1 GMD1 GDP-D-mannose 4,6-dehydratase (MUR1) 0.02 OrthoFinder output from all 47 species
Pir_g18042 GMD1 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g00734 GMD1 EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_11890V3.1 GMD2, MUR1,... NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006121 GMD1 EC_4.2 carbon-oxygen lyase & original description: CDS=127-1179 0.03 OrthoFinder output from all 47 species
Smo99252 GMD1 Carbohydrate metabolism.nucleotide sugar... 0.04 OrthoFinder output from all 47 species
Solyc02g084210.1.1 GMD1, Solyc02g084210 GDP-D-mannose 4,6-dehydratase (MUR1) 0.03 OrthoFinder output from all 47 species
Tin_g15131 GMD1 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e036558_P001 GMD2, MUR1,... GDP-D-mannose 4,6-dehydratase (MUR1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 10 324
No external refs found!