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  5. Ore_g23580

Ore_g23580


Description : not classified & original description: none


Gene families : OG0000102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g23580
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT5G19310 No alias Homeotic gene regulator 0.04 OrthoFinder output from all 47 species
AT5G66750 CHR01, CHR1,... chromatin remodeling 1 0.03 OrthoFinder output from all 47 species
Als_g22693 CHR17 ATPase component *(CHR11/CHR17) of ISWI chromatin... 0.02 OrthoFinder output from all 47 species
Als_g59637 CHR11 ATPase component *(CHR11/CHR17) of ISWI chromatin... 0.02 OrthoFinder output from all 47 species
Aspi01Gene50287.t1 CHR01, CHR1,... chromatin remodeling factor *(DDM1) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0043.g027039 No alias not classified & original description: CDS=1-2691 0.03 OrthoFinder output from all 47 species
Azfi_s0354.g066689 CHR11 ATPase component *(CHR11/CHR17) of ISWI chromatin... 0.03 OrthoFinder output from all 47 species
Azfi_s0596.g078827 CHR11 ATPase component *(CHR11/CHR17) of ISWI chromatin... 0.03 OrthoFinder output from all 47 species
Cba_g13700 No alias chromatin remodeling factor *(ALC1) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000545.10 ATCHR12 Probable ATP-dependent DNA helicase CHR12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020848.66 No alias Probable helicase CHR10 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dde_g08436 CHR5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13222 ATCHR12 SMARCA component *(SYD/BRM/MINU) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27055 PKL, GYM, CHR6,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008742 No alias not classified & original description: CDS=1-2037 0.03 OrthoFinder output from all 47 species
Sam_g22507 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo130534 PKR1, CHR4 Chromatin organisation.chromatin remodeling... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA

No InterPro domains available for this sequence

No external refs found!