Ore_g23545 (ATCSLD3, KJK, CSLD3)


Aliases : ATCSLD3, KJK, CSLD3

Description : mannan synthase *(CSLD) & original description: none


Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g23545

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00116140 ATCSLD3, KJK,... Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.03 OrthoFinder output from all 47 species
AMTR_s00081p00171100 AtCESA1, RSW1,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
AMTR_s00103p00124340 IXR1, CEV1,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
AT4G32410 AtCESA1, RSW1, CESA1 cellulose synthase 1 0.02 OrthoFinder output from all 47 species
Adi_g011565 IXR1, CEV1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g044360 ATCSLD4, CSLD4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10683 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30902 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Aop_g07972 ATCSLD2, CSLD2 mannan synthase *(CSLD) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene23400.t1 ATCSLD3, KJK,... mannan synthase *(CSLD) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene23400.t2 ATCSLD3, KJK,... mannan synthase *(CSLD) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30179.t1 ATCSLD3, KJK,... mannan synthase *(CSLD) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene69637.t1 ATCSLD3, KJK,... mannan synthase *(CSLD) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008840 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: CDS=44-3832 0.03 OrthoFinder output from all 47 species
Cba_g31777 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Dac_g31942 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04030 IXR1, CEV1,... catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Ehy_g06209 CESA6, PRC1, IXR2, E112 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Ehy_g18330 ATCSLD2, CSLD2 mannan synthase *(CSLD) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23161 AtCESA1, RSW1, CESA1 catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Ehy_g27936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013057001 ATCSLD2, CSLD2 Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.03 OrthoFinder output from all 47 species
GSVIVT01030467001 CSLB04, ATCSLB4, ATCSLB04 Cellulose synthase-like protein H1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os03g62090.1 CESA6, PRC1,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
LOC_Os06g22980.1 CSLD1, ATCSLD1,... mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species
LOC_Os07g36610.1 ATCSLD3, KJK,... D-glucan synthase (CSLF) 0.03 OrthoFinder output from all 47 species
LOC_Os07g36630.1 ATCSLD5, CSLD5,... D-glucan synthase (CSLF) 0.02 OrthoFinder output from all 47 species
Len_g14991 ATCSLD4, CSLD4 mannan synthase *(CSLD) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429177g0010 CESA8, LEW2,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
MA_140410g0010 MUR10, ATCESA7,... catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
MA_183130g0010 CESA4, NWS2, IRX5 catalytic component CesA of cellulose synthase complex 0.02 OrthoFinder output from all 47 species
MA_8061832g0010 CESA4, NWS2, IRX5 Cellulose synthase A catalytic subunit 4 [UDP-forming]... 0.02 OrthoFinder output from all 47 species
Mp2g05660.1 ATCSLD3, KJK, CSLD3 catalytic component CesA of cellulose synthase complex.... 0.02 OrthoFinder output from all 47 species
Mp5g24550.1 ATCSLD3, KJK, CSLD3 mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species
Nbi_g09833 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19942 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005953 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: CDS=681-4157 0.04 OrthoFinder output from all 47 species
Sam_g24445 No alias catalytic component *(CesA) of cellulose synthase... 0.02 OrthoFinder output from all 47 species
Smo73698 AtCESA1, RSW1, CESA1 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
Solyc03g097050.3.1 ATCSLD3, KJK,... mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species
Spa_g49131 ATH-A, CESA2, ATCESA2 catalytic component *(CesA) of cellulose synthase... 0.03 OrthoFinder output from all 47 species
Spa_g51152 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19698 ATCSLD3, KJK, CSLD3 mannan synthase *(CSLD) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e039669_P001 ATCSLD5, CSLD5,... mannan synthase (CSLD) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016760 cellulose synthase (UDP-forming) activity IEA Interproscan
BP GO:0030244 cellulose biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR005150 Cellulose_synth 13 614
No external refs found!