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  5. Ore_g23146

Ore_g23146


Description : not classified & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g23146
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00157p00061490 RHC1A,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Adi_g012249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g012552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g019629 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g03172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46210 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05181 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g11430 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22737.t1 Aspi01Gene22737 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04251 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g16758 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g01160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11152 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g14500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g20870.1 LOC_Os03g20870 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Len_g07549 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05536 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g10979 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Msp_g25662 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Msp_g47303 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011589 No alias not classified & original description: CDS=1-987 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021939 No alias not classified & original description: CDS=1-1164 0.03 OrthoFinder output from all 47 species
Spa_g15447 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 15 57
No external refs found!