1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g22989

Ore_g22989


Description : not classified & original description: none


Gene families : OG0000875 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000875_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g22989
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT3G06590 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G57780 No alias EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12... 0.03 OrthoFinder output from all 47 species
Ala_g22164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08906.t1 Aspi01Gene08906 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19703 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_14677 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Gb_14678 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os01g14110.1 LOC_Os01g14110 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_27939g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_40267g0020 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_93614g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA

No InterPro domains available for this sequence

No external refs found!