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  5. Ore_g20188

Ore_g20188 (PMDH1)


Aliases : PMDH1

Description : peroxisomal NAD-dependent malate dehydrogenase & original description: none


Gene families : OG0000664 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000664_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g20188

Target Alias Description ECC score Gene Family Method Actions
AT5G09660 PMDH2 peroxisomal NAD-malate dehydrogenase 2 0.07 OrthoFinder output from all 47 species
Adi_g060426 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.02 OrthoFinder output from all 47 species
Aev_g01101 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.05 OrthoFinder output from all 47 species
Ala_g01385 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.03 OrthoFinder output from all 47 species
Aob_g07797 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.08 OrthoFinder output from all 47 species
Aop_g00482 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.08 OrthoFinder output from all 47 species
Aspi01Gene69164.t1 PMDH1, Aspi01Gene69164 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02437 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.05 OrthoFinder output from all 47 species
Cba_g03815 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.03 OrthoFinder output from all 47 species
Ceric.28G009700.1 PMDH1, Ceric.28G009700 peroxisomal NAD-dependent malate dehydrogenase &... 0.03 OrthoFinder output from all 47 species
Cre10.g423250 PMDH1 Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Dcu_g01037 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.02 OrthoFinder output from all 47 species
Dde_g20852 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.05 OrthoFinder output from all 47 species
Ehy_g00867 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.04 OrthoFinder output from all 47 species
GSVIVT01036965001 PMDH1 Lipid metabolism.lipid degradation.fatty acid... 0.07 OrthoFinder output from all 47 species
Gb_00793 PMDH1 peroxisomal NAD-dependent malate dehydrogenase 0.04 OrthoFinder output from all 47 species
LOC_Os03g56280.1 PMDH1, LOC_Os03g56280 peroxisomal NAD-dependent malate dehydrogenase 0.05 OrthoFinder output from all 47 species
LOC_Os07g43700.2 MDH, LOC_Os07g43700 malate dehydrogenase component of AAA-ATPase motor complex 0.03 OrthoFinder output from all 47 species
Lfl_g01023 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.03 OrthoFinder output from all 47 species
MA_87937g0010 PMDH1 peroxisomal NAD-dependent malate dehydrogenase 0.06 OrthoFinder output from all 47 species
Mp2g08440.1 PMDH1 peroxisomal NAD-dependent malate dehydrogenase 0.02 OrthoFinder output from all 47 species
Msp_g06714 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.06 OrthoFinder output from all 47 species
Nbi_g02729 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.06 OrthoFinder output from all 47 species
Pir_g12090 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.06 OrthoFinder output from all 47 species
Pnu_g00639 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.03 OrthoFinder output from all 47 species
Ppi_g02813 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.03 OrthoFinder output from all 47 species
Ppi_g61921 MDH malate dehydrogenase component of AAA-ATPase motor... 0.04 OrthoFinder output from all 47 species
Sam_g16454 No alias peroxisomal NAD-dependent malate dehydrogenase &... 0.02 OrthoFinder output from all 47 species
Spa_g10807 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.06 OrthoFinder output from all 47 species
Tin_g01665 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.04 OrthoFinder output from all 47 species
Tin_g19033 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.03 OrthoFinder output from all 47 species
Zm00001e005838_P001 PMDH1, Zm00001e005838 peroxisomal NAD-dependent malate dehydrogenase 0.05 OrthoFinder output from all 47 species
Zm00001e035622_P001 MDH, Zm00001e035622 Malate dehydrogenase, chloroplastic OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001236 Lactate/malate_DH_N 70 212
IPR022383 Lactate/malate_DH_C 214 378
No external refs found!