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  5. Ore_g19682

Ore_g19682 (ABO1, ELO2)


Aliases : ABO1, ELO2

Description : component *(ELP1) of ELONGATOR transcription elongation complex & original description: none


Gene families : OG0006371 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006371_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g19682

Target Alias Description ECC score Gene Family Method Actions
AT5G13680 ABO1, ELO2 IKI3 family protein 0.05 OrthoFinder output from all 47 species
Adi_g017444 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.03 OrthoFinder output from all 47 species
Aev_g35033 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.02 OrthoFinder output from all 47 species
Ceric.14G027500.1 ABO1, ELO2,... component *(ELP1) of ELONGATOR transcription elongation... 0.04 OrthoFinder output from all 47 species
Cre08.g372500 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
Ehy_g14344 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.04 OrthoFinder output from all 47 species
GSVIVT01016590001 ABO1, ELO2 RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
Gb_20472 ABO1, ELO2 component ELP1 of ELONGATOR transcription elongation complex 0.05 OrthoFinder output from all 47 species
LOC_Os07g37640.1 ABO1, ELO2,... component ELP1 of ELONGATOR transcription elongation complex 0.05 OrthoFinder output from all 47 species
Lfl_g09984 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.02 OrthoFinder output from all 47 species
Pnu_g06925 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.04 OrthoFinder output from all 47 species
Smo235886 ABO1, ELO2 RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species
Solyc05g054630.4.1 ABO1, ELO2,... component ELP1 of ELONGATOR transcription elongation complex 0.07 OrthoFinder output from all 47 species
Spa_g17971 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0002098 tRNA wobble uridine modification IEA Interproscan
CC GO:0033588 elongator holoenzyme complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006849 Elp1 160 1010
IPR006849 Elp1 1 156
No external refs found!