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  5. Ore_g19327

Ore_g19327 (LACS4)


Aliases : LACS4

Description : EC_6.2 ligase forming carbon-sulfur bond & original description: none


Gene families : OG0000612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g19327

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00113600 CER8, LACS1,... Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00003p00114270 CER8, LACS1,... Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g050236 ATLACS7, LACS7 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene33526.t1 LACS4, Aspi01Gene33526 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33528.t1 CER8, LACS1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G023000.1 LACS4, Ceric.24G023000 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.33G045300.1 LACS6, ATLACS6,... EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Cre12.g507400 LACS6, ATLACS6 Lipid metabolism.lipid degradation.fatty acid... 0.02 OrthoFinder output from all 47 species
Dde_g00814 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014643 LACS6, ATLACS6 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Sam_g15770 No alias EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Sam_g24388 No alias EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
CC GO:0070449 elongin complex IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 535 576
IPR000873 AMP-dep_Synth/Lig_com 53 525
No external refs found!