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  5. Ore_g18473

Ore_g18473


Description : alkaline sucrose-specific invertase *(CIN) & original description: none


Gene families : OG0000598 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000598_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g18473
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00232150 evm_27.TU.AmTr_v1... Probable alkaline/neutral invertase B OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Lfl_g06678 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g30628 No alias alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Mp2g25990.1 No alias alkaline sucrose-specific invertase (CIN) 0.02 OrthoFinder output from all 47 species
Pnu_g14041 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0225.g026328 CINV2 alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Sam_g06319 No alias alkaline sucrose-specific invertase *(CIN) & original... 0.03 OrthoFinder output from all 47 species
Spa_g10147 No alias alkaline sucrose-specific invertase *(CIN) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e013526_P001 CINV2, Zm00001e013526 Alkaline/neutral invertase CINV2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
InterPro domains Description Start Stop
IPR024746 Glyco_hydro_100 114 549
No external refs found!