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  5. Ore_g18088

Ore_g18088


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g18088

Target Alias Description ECC score Gene Family Method Actions
Aev_g07955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g37660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26670 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0022.g016133 No alias ssDNA-binding protein *(OSB) & original description: CDS=1-2574 0.04 OrthoFinder output from all 47 species
Azfi_s0408.g068470 CRR22 not classified & original description: CDS=1-1812 0.03 OrthoFinder output from all 47 species
Dac_g30481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43188 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38858 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g04899 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26041 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_39595g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Nbi_g22164 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05129 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g09259 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g14266 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g19959 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g23510 CRR22 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g31815 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g32582 EMB2261 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g35704 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36262 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g36479 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g37271 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g43234 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006421 No alias not classified & original description: CDS=1-675 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007342 No alias not classified & original description: CDS=1-912 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013079 No alias not classified & original description: CDS=41-367 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015487 No alias not classified & original description: CDS=260-3676 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016963 No alias not classified & original description: CDS=1-2211 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019840 No alias not classified & original description: CDS=144-2663 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0263.g026918 No alias not classified & original description: CDS=151-2130 0.03 OrthoFinder output from all 47 species
Sam_g13516 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18645 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30124 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34681 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36161 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g36339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo134538 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Spa_g23949 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30384 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37535 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g35082 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!