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  5. Ore_g17254

Ore_g17254 (SYT5, NTMC2T2.1,...)


Aliases : SYT5, NTMC2T2.1, SYTE, NTMC2TYPE2.1, ATSYTE

Description : not classified & original description: none


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g17254
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
AT5G11100 NTMC2TYPE2.2,... Calcium-dependent lipid-binding (CaLB domain) family protein 0.04 OrthoFinder output from all 47 species
Adi_g088411 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g41439 NTMC2TYPE1.1,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Cre12.g559450 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os08g20544.1 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Nbi_g09577 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Pir_g30145 NTMC2T1.2, SYTB,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013057_P001 NTMC2T1.3, SYT3,... endoplasmic reticulum-plasma membrane tethering protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 69 227
IPR039010 Synaptotagmin_SMP 234 386
IPR000008 C2_dom 402 506
IPR000008 C2_dom 590 631
No external refs found!