- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LACS4
Description : EC_6.2 ligase forming carbon-sulfur bond & original description: none
Gene families : OG0000612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000612_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g15713 | |
| Cluster | HCCA: Cluster_25 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g114074 | LACS4 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g04110 | LACS4 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene33526.t1 | LACS4, Aspi01Gene33526 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene33528.t1 | CER8, LACS1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0060.g034812 | LACS4 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g11566 | LACS4 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g13723 | LACS4 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08877 | LACS4 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g01611 | LACS4 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432761g0010 | LACS4 | Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| MA_839621g0010 | No alias | Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04589 | LACS6, ATLACS6 | EC_6.2 ligase forming carbon-sulfur bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g079240.3.1 | CER8, LACS1,... | Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e040332_P001 | CER8, LACS1,... | Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000873 | AMP-dep_Synth/Lig_com | 67 | 522 |
| No external refs found! |