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  5. Ore_g15241

Ore_g15241 (CLPP6, NCLPP1, NCLPP6)


Aliases : CLPP6, NCLPP1, NCLPP6

Description : proteolytic core component *(ClpP1/3-6) of chloroplast Clp-type protease complex & original description: none


Gene families : OG0006579 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g15241
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Adi_g021569 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Ala_g37589 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Als_g13136 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Cba_g02386 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Ehy_g00383 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.02 OrthoFinder output from all 47 species
GSVIVT01031936001 CLPP6, NCLPP1, NCLPP6 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Gb_39858 CLPP6, NCLPP1, NCLPP6 proteolytic core component ClpP1/3-6 of chloroplast... 0.02 OrthoFinder output from all 47 species
Len_g09909 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Lfl_g05845 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Mp4g17530.1 CLPP6, NCLPP1, NCLPP6 proteolytic core component ClpP1/3-6 of chloroplast... 0.02 OrthoFinder output from all 47 species
Msp_g02713 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.03 OrthoFinder output from all 47 species
Pir_g16719 CLPP6, NCLPP1, NCLPP6 proteolytic core component *(ClpP1/3-6) of chloroplast... 0.02 OrthoFinder output from all 47 species
Solyc10g051310.2.1 CLPP6, NCLPP1,... proteolytic core component ClpP1/3-6 of chloroplast... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 78 252
No external refs found!