Ore_g15152 (gsl12, ATGSL12)

Aliases : gsl12, ATGSL12

Description : EC_2.4 glycosyltransferase & original description: none

Gene families : OG0000112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g15152
Cluster	HCCA: Cluster_137

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00014p00034060	GSL04, atgsl4,...	Cell wall.callose.callose synthase	0.02	OrthoFinder output from all 47 species
AT2G13680	GLS2, ATGSL02, CALS5	callose synthase 5	0.02	OrthoFinder output from all 47 species
AT2G31960	GSL03, ATGSL3, ATGSL03	glucan synthase-like 3	0.02	OrthoFinder output from all 47 species
Adi_g004450	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g011962	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g060375	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g18601	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g18748	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g27518	ATGSL08, ATGSL8,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g34220	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g01985	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g13328	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g14868	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g13887	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g29718	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g35568	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g06816	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g78442	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.01G012200.1	GSL7, ATGSL07,...	EC_2.4 glycosyltransferase & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.03G005500.1	ATGSL10, gsl10,...	EC_2.4 glycosyltransferase & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.10G079800.1	ATGSL08, ATGSL8,...	EC_2.4 glycosyltransferase & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.32G064600.1	gsl12, ATGSL12,...	EC_2.4 glycosyltransferase & original description:...	0.02	OrthoFinder output from all 47 species
Cre13.g574900	GSL7, ATGSL07,...	Cell wall.callose.callose synthase	0.01	OrthoFinder output from all 47 species
Dac_g17127	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g09376	GSL03, ATGSL3, ATGSL03	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g15465	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os01g55040.1	GSL5, PMR4,...	callose synthase	0.02	OrthoFinder output from all 47 species
LOC_Os06g51270.1	gsl12, ATGSL12,...	callose synthase	0.02	OrthoFinder output from all 47 species
Len_g08856	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Len_g16772	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Len_g54342	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g12587	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g43330	GLS2, ATGSL02, CALS5	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g10967	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g12628	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g05356	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015665	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: CDS=880-4923	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020400	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: CDS=5-4228	0.03	OrthoFinder output from all 47 species
Sam_g03432	No alias	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g39583	No alias	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g50509	No alias	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Smo267830	GLS2, ATGSL02, CALS5	Cell wall.callose.callose synthase	0.02	OrthoFinder output from all 47 species
Smo439692	GSL5, PMR4,...	Cell wall.callose.callose synthase	0.02	OrthoFinder output from all 47 species
Solyc01g006350.4.1	ATGSL10, gsl10,...	callose synthase	0.03	OrthoFinder output from all 47 species
Solyc01g006360.4.1	ATGSL10, gsl10,...	Callose synthase 9 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e000142_P001	ATGSL10, gsl10,...	callose synthase	0.02	OrthoFinder output from all 47 species
Zm00001e016298_P001	GSL06, ATGSL06,...	callose synthase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEA	Interproscan
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	None	Extended
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005730	nucleolus	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
MF	GO:0008134	transcription factor binding	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR026899	FKS1-like_dom1	311	422
IPR039431	Vta1/CALS_N	34	166
IPR003440	Glyco_trans_48	1038	1241

External Links

No external refs found!

Ore_g15152 (gsl12, ATGSL12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation