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  5. Ore_g15085

Ore_g15085 (APRL4, ATAPRL4)


Aliases : APRL4, ATAPRL4

Description : regulatory protein *(ZC11A) of mRNA export & original description: none


Gene families : OG0001116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g15085

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00158730 evm_27.TU.AmTr_v1... RNA processing.messenger ribonucleoprotein particle... 0.03 OrthoFinder output from all 47 species
Aop_g21805 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene62776.t1 Aspi01Gene62776 regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
LOC_Os04g57600.1 LOC_Os04g57600 C3H zinc finger transcription factor. regulatory... 0.02 OrthoFinder output from all 47 species
Lfl_g25651 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.02 OrthoFinder output from all 47 species
Lfl_g30774 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Pir_g37929 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g32085 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Spa_g17319 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.02 OrthoFinder output from all 47 species
Tin_g02840 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 872 954
IPR041686 Znf-CCCH_3 14 70
No external refs found!