| Als_g24387 | ATH9, TH9, TRX H9 | H-type thioredoxin *(Trx-H) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g53794 | ATH9, TH9, TRX H9 | H-type thioredoxin *(Trx-H) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g56864 | TRXH2, TRX2,... | H-type thioredoxin *(Trx-H) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g24124 | TRXH2, TRX2,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g15807 | TRXH2, TRX2,... | H-type thioredoxin *(Trx-H) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g18955 | TRXH2, TRX2,... | H-type thioredoxin *(Trx-H) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g29083 | ATTRX1, ATTRX H1, TRX1 | H-type thioredoxin *(Trx-H) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g34058 | ATTRX3, ATTRXH3,... | H-type thioredoxin *(Trx-H) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g35170 | TH7, ATH7 | H-type thioredoxin *(Trx-H) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g60394 | ATTRX3, ATTRXH3,... | protein-S-nitrosothiol reductase *(TRX5) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g15903 | ATTRX4, ATH4 | H-type thioredoxin *(Trx-H) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g21956 | ATH5, ATTRX5, TRX5, LIV1 | H-type thioredoxin *(Trx-H) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g33103 | TY1, TRX-Y1, ATY1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g28003 | TRXH2, TRX2,... | H-type thioredoxin *(Trx-H) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g29725 | ATTRX1, ATTRX H1, TRX1 | H-type thioredoxin *(Trx-H) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06672 | ATTRX1, ATTRX H1, TRX1 | H-type thioredoxin *(Trx-H) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
ECC Pair graph <td><a href="/sequence/view/912771" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/912771">Sam_g14527</a></td> <td><span class="text-muted">No alias</span></td> <td>H-type thioredoxin *(Trx-H) & original description: none</td> <td>0.02</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/33969996" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/201382/57/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/565595" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/565595">Tin_g16418</a></td> <td>ATH5, ATTRX5, TRX5, LIV1</td> <td>H-type thioredoxin *(Trx-H) & original description: none</td> <td>0.04</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/33969998" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/201382/57/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/582479" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/582479">Tin_g33302</a></td> <td>ATTRX4, ATH4</td> <td>H-type thioredoxin *(Trx-H) & original description: none</td> <td>0.03</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/33970000" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/201382/57/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/585463" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/585463">Tin_g36286</a></td> <td>TRXH2, TRX2,...</td> <td>H-type thioredoxin *(Trx-H) & original description: none</td> <td>0.02</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/33970002" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/201382/57/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> </tbody> </table> </div> <br> <h3 class="banner-blue" id="annotation">Functional Annotation</h3> <div class="panel with-nav-tabs panel-default"> <div class="panel-heading"> <ul class="nav nav-tabs"> <li class="active"><a href="#tab1default" data-toggle="tab">GO</a></li> <li><a href="#tab2default" data-toggle="tab">Predicted GO</a></li> <li><a href="#tab3default" data-toggle="tab">InterPro</a></li> </ul> </div> <div> <div class="tab-content"> <div class="tab-pane fade in active" id="tab1default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr> <td class="col-xs-12"><p>No GO annotation available for this sequence</p></td> </tr> </tbody> </table> </div> <div class="panel-body"> <a href="#" id="go_toggle">Toggle parental</a> </div> </div> <div class="tab-pane fade" id="tab2default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="predicted_go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/218" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways involving allantoin, (2,5-dioxo-4-imidazolidinyl)urea, an intermediate or end product of purine catabolism." [GOC:mah, ISBN:0198547684]">GO:0000255</a></td> <td class="col-xs-6">allantoin metabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/219" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the breakdown of allantoin, (2,5-dioxo-4-imidazolidinyl)urea." [GOC:mah, ISBN:0198547684]">GO:0000256</a></td> <td class="col-xs-6">allantoin catabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/636" data-toggle="tooltip" data-placement="top" title=""A DNA-binding transcription factor activity that modulates the transcription of specific gene sets transcribed by RNA polymerase II." [GOC:txnOH-2018]">GO:0000981</a></td> <td class="col-xs-6">DNA-binding transcription factor activity, RNA polymerase II-specific</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/2700" data-toggle="tooltip" data-placement="top" title=""Binding to monomeric or multimeric forms of actin, including actin filaments." [GOC:clt]">GO:0003779</a></td> <td class="col-xs-6">actin binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/6080" data-toggle="tooltip" data-placement="top" title=""Binding to a protein component of a cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton)." [GOC:mah]">GO:0008092</a></td> <td class="col-xs-6">cytoskeletal protein binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10553" data-toggle="tooltip" data-placement="top" title=""Catalysis of the release of ammonia or one of its derivatives, with the formation of a double bond or ring. Enzymes with this activity may catalyze the actual elimination of the ammonia, amine or amide, e.g. CH-CH(-NH-R) = C=CH- + NH2-R. Others, however, catalyze elimination of another component, e.g. water, which is followed by spontaneous reactions that lead to breakage of the C-N bond, e.g. L-serine ammonia-lyase (EC:4.3.1.17), so that the overall reaction is C(-OH)-CH(-NH2) = CH2-CO- + NH3, i.e. an elimination with rearrangement. The sub-subclasses of EC:4.3 are the ammonia-lyases (EC:4.3.1), lyases acting on amides, amidines, etc. (EC:4.3.2), the amine-lyases (EC:4.3.3), and other carbon-nitrogen lyases (EC:4.3.99)." [EC:4.3.-.-]">GO:0016840</a></td> <td class="col-xs-6">carbon-nitrogen lyase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10555" data-toggle="tooltip" data-placement="top" title=""Catalysis of the release of amides or amidines by the cleavage of a carbon-nitrogen bond or the reverse reaction with an amide or amidine as a substrate." [EC:4.3.-.-, GOC:krc]">GO:0016842</a></td> <td class="col-xs-6">amidine-lyase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/21008" data-toggle="tooltip" data-placement="top" title=""Binding to an ion, a charged atoms or groups of atoms." [GOC:jl]">GO:0043167</a></td> <td class="col-xs-6">ion binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/21400" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the breakdown of an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group." [GOC:curators]">GO:0043605</a></td> <td class="col-xs-6">amide catabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/21931" data-toggle="tooltip" data-placement="top" title=""Binding to a protein or a protein-containing complex to assist the protein folding process." [GOC:mtg_cambridge_2009]">GO:0044183</a></td> <td class="col-xs-6">protein folding chaperone</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/24056" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the breakdown of heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings)." [GOC:ai]">GO:0046700</a></td> <td class="col-xs-6">heterocycle catabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/24238" data-toggle="tooltip" data-placement="top" title=""Binding to a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver." [ISBN:0198506732]">GO:0046914</a></td> <td class="col-xs-6">transition metal ion binding</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/26506" data-toggle="tooltip" data-placement="top" title=""Catalysis of the reaction: (S)-ureidoglycolate = glyoxylate + urea." [EC:4.3.2.3, RHEA:11304]">GO:0050385</a></td> <td class="col-xs-6">ureidoglycolate lyase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/39010" data-toggle="tooltip" data-placement="top" title=""Binding to a protein or a protein-containing complex to assist the protein folding process, driven by ATP hydrolysis." [PMID:27365453]">GO:0140662</a></td> <td class="col-xs-6">ATP-dependent protein folding chaperone</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/40808" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the breakdown of organic cyclic compound." [GOC:TermGenie]">GO:1901361</a></td> <td class="col-xs-6">organic cyclic compound catabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">BP</td> <td class="col-xs-2"><a href="/go/view/41007" data-toggle="tooltip" data-placement="top" title=""The chemical reactions and pathways resulting in the breakdown of organonitrogen compound." [GOC:pr, GOC:TermGenie]">GO:1901565</a></td> <td class="col-xs-6">organonitrogen compound catabolic process</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> </tbody> </table> </div> </div> <div class="tab-pane fade" id="tab3default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="interpro_table"> <thead> <tr> <th class="col-xs-3" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/interpro_domain" data-target="#helpModal">InterPro domains</abbr></th> <th class="col-xs-5" data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Start</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Stop</th> </tr> </thead> <tbody> <tr> <td class="col-xs-3"><a href="/interpro/view/11703">IPR013766</a></td> <td class="col-xs-5">Thioredoxin_domain</td> <td class="col-xs-2">10</td> <td class="col-xs-2">102</td> </tr> </tbody> </table> </div> </div> </div> </div> </div> <div class="row"> <div class="col-lg-12 col-md-12 col-sm-12"> <div class="panel panel-default"> <div class="panel-heading" id="links">External Links</div> <div class="table-responsive"> <table class="table table-striped table-separated"> <tbody> <tr> <td><em>No external refs found!</em></td> </td> </tr> </tbody> </table> </div> </div> </div> </div> <div class="modal" id="profileModal" tabindex="-1" role="dialog" aria-labelledby="profileModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> </div> </div> </div> <footer class="footer" id="footer"> <div class="container"> <div class="row"> <div class="col-xs-2"><strong class="text-muted"><a href="/features" class="text-muted">CoNekT</a></strong></div> <div class="col-xs-2"><a href="/about" class="text-muted">About</a></div> <div class="col-xs-2"><a href="/contact" class="text-muted">Contact</a></div> <div class="col-xs-2"><a href="/disclaimer" class="text-muted">Disclaimer</a></div> <div class="col-xs-2"><a href="/privacy" class="text-muted">Privacy policy</a></div> </div> </div> </footer> <div class="modal" id="helpModal" tabindex="-1" role="dialog" aria-labelledby="helpModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> <div class="modal" id="loaderModal" tabindex="-1" role="dialog" aria-labelledby="loaderModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> <div class="modal-body"> <div id="leafy_loader"></div> <p class="text-center text-muted" id="leafy_loader_text">Loading ... please wait ... </p> <p class="text-center" id="leafy_loader_close_btn" style="display:none"><button type="button" class="btn btn-primary" data-dismiss="modal" style>Close</button></p> </div> </div> </div> </div> <script src="/static/js/jquery.min.js"></script> <script src="/static/js/bootstrap.min.js"></script> <script src="/static/js/stupidtable.min.js"></script> <script src="/static/js/TweenMax.min.js"></script> <script src="/static/js/jquery.qtip.min.js"></script> <script src="/static/js/planet_loader.js"></script> <script>
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if (myChart.options.pan.enabled) {
$(this).addClass("btn-success");
$(this).removeClass("btn-danger");
$(this).removeClass("btn-default");
} else {
$(this).addClass("btn-danger");
$(this).removeClass("btn-success");
$(this).removeClass("btn-default");
}
});
});
});
</script> </body> </html>
