Ore_g13992


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g13992

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272900 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
AMTR_s00008p00241920 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
AMTR_s00083p00015670 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AT2G36730 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g003872 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05709 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g40645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene31801.t1 Aspi01Gene31801 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07505 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20880 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G013000.1 EMB2758, Ceric.10G013000 not classified & original description: pacid=50613337... 0.02 OrthoFinder output from all 47 species
Ceric.10G047500.1 Ceric.10G047500 not classified & original description: pacid=50612222... 0.02 OrthoFinder output from all 47 species
Ceric.10G069100.1 Ceric.10G069100 not classified & original description: pacid=50612724... 0.04 OrthoFinder output from all 47 species
Ceric.15G052100.1 Ceric.15G052100 not classified & original description: pacid=50640703... 0.03 OrthoFinder output from all 47 species
Ceric.1Z045400.1 Ceric.1Z045400 not classified & original description: pacid=50637450... 0.03 OrthoFinder output from all 47 species
Ceric.25G017300.1 Ceric.25G017300 not classified & original description: pacid=50594270... 0.04 OrthoFinder output from all 47 species
Ceric.25G070400.1 Ceric.25G070400 not classified & original description: pacid=50594567... 0.02 OrthoFinder output from all 47 species
Ceric.27G020400.1 Ceric.27G020400 not classified & original description: pacid=50605502... 0.03 OrthoFinder output from all 47 species
Ceric.30G012500.1 Ceric.30G012500 not classified & original description: pacid=50608997... 0.04 OrthoFinder output from all 47 species
Dac_g05194 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g25047 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08305 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43303 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43321 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g44186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47921 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g44480.1 LOC_Os02g44480 Pentatricopeptide repeat-containing protein At5g39350... 0.02 OrthoFinder output from all 47 species
LOC_Os07g15570.1 CRR2, LOC_Os07g15570 Pentatricopeptide repeat-containing protein At2g46050,... 0.02 OrthoFinder output from all 47 species
LOC_Os12g15460.1 LOC_Os12g15460 Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
Len_g18300 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_102449g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
MA_25584g0010 DOT4 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
Ore_g14064 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19780 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36262 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g36479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40875 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g43621 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g39036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04238 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06762 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30091 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11085 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30547 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020289 No alias not classified & original description: CDS=1-1509 0.03 OrthoFinder output from all 47 species
Sam_g17157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 154 202
IPR002885 Pentatricopeptide_repeat 63 83
IPR002885 Pentatricopeptide_repeat 230 252
No external refs found!