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  5. Ore_g13268

Ore_g13268


Description : not classified & original description: none


Gene families : OG0007012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007012_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g13268

Target Alias Description ECC score Gene Family Method Actions
Cba_g19057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08928 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43071 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47758 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 5 52
IPR002885 Pentatricopeptide_repeat 239 285
IPR002885 Pentatricopeptide_repeat 122 169
IPR002885 Pentatricopeptide_repeat 96 121
IPR002885 Pentatricopeptide_repeat 213 237
No external refs found!