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  5. Ore_g12890

Ore_g12890 (SVR7)


Aliases : SVR7

Description : not classified & original description: none


Gene families : OG0004930 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004930_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g12890

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00074820 SVR7,... Pentatricopeptide repeat-containing protein At4g16390,... 0.03 OrthoFinder output from all 47 species
AT4G16390 SVR7 pentatricopeptide (PPR) repeat-containing protein 0.03 OrthoFinder output from all 47 species
AT5G46580 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g113698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02200 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07311 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.15G014300.1 Ceric.15G014300 not classified & original description: pacid=50639905... 0.03 OrthoFinder output from all 47 species
Dac_g15325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07226 SVR7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003493001 SVR7 Pentatricopeptide repeat-containing protein At4g16390,... 0.03 OrthoFinder output from all 47 species
GSVIVT01003496001 SVR7 Pentatricopeptide repeat-containing protein At4g16390,... 0.01 OrthoFinder output from all 47 species
MA_283144g0010 No alias Pentatricopeptide repeat-containing protein At5g46580,... 0.04 OrthoFinder output from all 47 species
Mp1g08510.1 No alias Pentatricopeptide repeat-containing protein At5g46580,... 0.04 OrthoFinder output from all 47 species
Pir_g15542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g077140.1.1 Solyc08g077140 Pentatricopeptide repeat-containing protein At5g46580,... 0.03 OrthoFinder output from all 47 species
Solyc11g012670.1.1 SVR7, Solyc11g012670 Pentatricopeptide repeat-containing protein At4g16390,... 0.04 OrthoFinder output from all 47 species
Zm00001e000850_P001 SVR7, Zm00001e000850 Pentatricopeptide repeat-containing protein ATP4,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 166 211
IPR002885 Pentatricopeptide_repeat 239 281
IPR002885 Pentatricopeptide_repeat 306 355
No external refs found!