1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g12786

Ore_g12786


Description : assembly factor (eIF1) of eIF1 & original description: none


Gene families : OG0000506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000506_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g12786

Target Alias Description ECC score Gene Family Method Actions
AT5G54940 No alias Translation initiation factor SUI1 family protein 0.03 OrthoFinder output from all 47 species
Ala_g29467 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26986 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0359.g066860 No alias assembly factor (eIF1) of eIF1 & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g40202 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Cre06.g298100 No alias Protein biosynthesis.translation... 0.01 OrthoFinder output from all 47 species
Ehy_g11955 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030611001 No alias Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Pp3c6_4020V3.1 Pp3c6_4020 Translation initiation factor SUI1 family protein 0.01 OrthoFinder output from all 47 species
Sam_g30924 No alias assembly factor (eIF1) of eIF1 & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000966 RNA 5'-end processing IEP HCCA
BP GO:0001682 tRNA 5'-leader removal IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
CC GO:0030677 ribonuclease P complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0099116 tRNA 5'-end processing IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001950 SUI1 63 137
No external refs found!