Ore_g12404 (ATCLC-C, CLC-C)

Aliases : ATCLC-C, CLC-C

Description : anion channel / anion:proton antiporter *(CLC) & original description: none

Gene families : OG0000501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000501_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g12404
Cluster	HCCA: Cluster_166

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00233520	CLC-A, ATCLC-A,...	Chloride channel protein CLC-a OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00013p00233550	ATCLC-B, CLC-B,...	Solute transport.carrier-mediated transport.CLC anion...	0.02	OrthoFinder output from all 47 species
AT5G40890	CLC-A, ATCLC-A,...	chloride channel A	0.02	OrthoFinder output from all 47 species
Adi_g058458	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Aev_g41935	ATCLC-B, CLC-B	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Als_g08137	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Als_g49592	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Aop_g38922	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Cba_g27347	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.37	ATCLC-C, CLC-C	anion channel / anion:proton antiporter (CLC)	0.03	OrthoFinder output from all 47 species
Dcu_g12890	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
LOC_Os04g55210.1	LOC_Os04g55210	anion channel / anion:proton antiporter (CLC)	0.03	OrthoFinder output from all 47 species
LOC_Os12g25200.1	ATCLC-B, CLC-B,...	anion channel / anion:proton antiporter (CLC)	0.03	OrthoFinder output from all 47 species
Pir_g14943	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016309	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Smo100906	ATCLC-C, CLC-C	Solute transport.carrier-mediated transport.CLC anion...	0.03	OrthoFinder output from all 47 species
Smo442632	ATCLC-C, CLC-C	Solute transport.carrier-mediated transport.CLC anion...	0.02	OrthoFinder output from all 47 species
Spa_g12049	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Tin_g23358	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Zm00001e013966_P001	Zm00001e013966	anion channel / anion:proton antiporter (CLC)	0.03	OrthoFinder output from all 47 species
Zm00001e019092_P002	ATCLC-C, CLC-C,...	anion channel / anion:proton antiporter (CLC)	0.02	OrthoFinder output from all 47 species
Zm00001e040930_P001	ATCLC-C, CLC-C,...	anion channel / anion:proton antiporter (CLC)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005244	voltage-gated monoatomic ion channel activity	None	Extended
MF	GO:0005247	voltage-gated chloride channel activity	IEA	Interproscan
MF	GO:0005253	monoatomic anion channel activity	None	Extended
MF	GO:0005254	chloride channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006820	monoatomic anion transport	None	Extended
BP	GO:0006821	chloride transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008308	voltage-gated monoatomic anion channel activity	None	Extended
MF	GO:0008509	monoatomic anion transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015103	inorganic anion transmembrane transporter activity	None	Extended
MF	GO:0015108	chloride transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030976	thiamine pyrophosphate binding	IEP	HCCA
MF	GO:0050997	quaternary ammonium group binding	IEP	HCCA
MF	GO:1901681	sulfur compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001807	Cl-channel_volt-gated	109	529

External Links

No external refs found!

Ore_g12404 (ATCLC-C, CLC-C)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation