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  5. Ore_g11104

Ore_g11104 (PBB1)


Aliases : PBB1

Description : beta-type-2 component *(PBB) of 26S proteasome & original description: none


Gene families : OG0004022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g11104
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
Adi_g012436 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aop_g04145 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000485 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cba_g14020 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Cre10.g424400 PBB1 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
Dac_g04547 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Dde_g05731 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Len_g01148 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Mp1g03530.1 PBB2 component beta type-2 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Msp_g07522 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Pir_g00293 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008733 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Sam_g15000 No alias beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Solyc05g013820.4.1 PBB1, Solyc05g013820 component beta type-2 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Zm00001e029814_P002 PBB1, Zm00001e029814 component beta type-2 of 26S proteasome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0042255 ribosome assembly IEP HCCA
BP GO:0042256 cytosolic ribosome assembly IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0097354 prenylation IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 37 217
No external refs found!