Ore_g10869 (ATVDAC1, VDAC1)

Aliases : ATVDAC1, VDAC1

Description : voltage-gated anion channel *(VDAC) & original description: none

Gene families : OG0000555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000555_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g10869
Cluster	HCCA: Cluster_158

Target	Alias	Description	ECC score	Gene Family Method
Aob_g01307	VDAC2, ATVDAC2	voltage-gated anion channel *(VDAC) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0486.g073441	ATVDAC3, VDAC3	voltage-gated anion channel *(VDAC) & original...	0.02	OrthoFinder output from all 47 species
Dac_g04097	ATVDAC3, VDAC3	voltage-gated anion channel *(VDAC) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g00730	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g12033	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g03715	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g04174	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g04176	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g17749	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g00570	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e032255_P001	ATVDAC3, VDAC3,...	voltage-gated anion channel (VDAC)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005741	mitochondrial outer membrane	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0019867	outer membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031966	mitochondrial membrane	None	Extended
CC	GO:0031968	organelle outer membrane	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	IEP	HCCA
MF	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IEP	HCCA
MF	GO:0001067	transcription regulatory region nucleic acid binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
MF	GO:0032422	purine-rich negative regulatory element binding	IEP	HCCA
CC	GO:0035145	exon-exon junction complex	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR027246	Porin_Euk/Tom40	4	269

External Links

No external refs found!