1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g10445

Ore_g10445


Description : component *(PRPF3) of U4/U6.U5 tri-snRNP complex & original description: none


Gene families : OG0005854 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005854_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g10445

Target Alias Description ECC score Gene Family Method Actions
Adi_g059318 No alias component *(PRPF3) of U4/U6.U5 tri-snRNP complex &... 0.04 OrthoFinder output from all 47 species
Aev_g05519 No alias component *(PRPF3) of U4/U6.U5 tri-snRNP complex &... 0.03 OrthoFinder output from all 47 species
Ala_g07036 No alias component *(PRPF3) of U4/U6.U5 tri-snRNP complex &... 0.05 OrthoFinder output from all 47 species
Dcu_g10004 No alias component *(PRPF3) of U4/U6.U5 tri-snRNP complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01032624001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.05 OrthoFinder output from all 47 species
LOC_Os09g07500.1 LOC_Os09g07500 protein factor PRPF3 of U4/U6 small nuclear... 0.07 OrthoFinder output from all 47 species
MA_10432248g0010 No alias protein factor PRPF3 of U4/U6 small nuclear... 0.08 OrthoFinder output from all 47 species
Nbi_g06266 No alias component *(PRPF3) of U4/U6.U5 tri-snRNP complex &... 0.04 OrthoFinder output from all 47 species
Sam_g12406 No alias component *(PRPF3) of U4/U6.U5 tri-snRNP complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e014268_P001 Zm00001e014268 protein factor PRPF3 of U4/U6 small nuclear... 0.04 OrthoFinder output from all 47 species
Zm00001e024816_P001 Zm00001e024816 protein factor PRPF3 of U4/U6 small nuclear... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR010541 Prp3_C 831 953
IPR013881 Pre-mRNA_splic_Prp3 579 806
No external refs found!