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  5. Ore_g10269

Ore_g10269


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g10269
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Adi_g085245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13171 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26898 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g45750.1 LOC_Os04g45750 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Len_g19264 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12485 No alias Trihelix-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
MA_10291373g0010 PTL no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_79519g0010 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Msp_g06014 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65125 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20365 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 138 224
IPR044822 Myb_DNA-bind_4 441 527
No external refs found!