Aliases : ATTIP1.3, TIP1;3, GAMMA-TIP3
Description : tonoplast intrinsic protein *(TIP) & original description: none
Gene families : OG0000095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000095_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ore_g10059 | |
Cluster | HCCA: Cluster_70 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g104685 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g03740 | DELTA-TIP2, TIP2;2 | tonoplast intrinsic protein *(TIP) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g04788 | ATTIP2;1,... | tonoplast intrinsic protein *(TIP) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01025188001 | PIP2B, PIP2;2 | Solute transport.channels.MIP family.plasma membrane... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01026944001 | PIP1C, TMP-B, PIP1;3 | Solute transport.channels.MIP family.plasma membrane... | 0.05 | OrthoFinder output from all 47 species | |
Len_g06238 | PIP3B, PIP2;8 | plasma membrane intrinsic protein *(PIP) & original... | 0.02 | OrthoFinder output from all 47 species | |
MA_10426681g0010 | PIP3B, PIP2;8 | plasma membrane intrinsic protein (PIP) | 0.03 | OrthoFinder output from all 47 species | |
MA_8571664g0010 | DELTA-TIP2, TIP2;2 | Probable aquaporin TIP2-2 OS=Oryza sativa subsp.... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e004496_P002 | BETA-TIP, Zm00001e004496 | tonoplast intrinsic protein (TIP) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e007523_P001 | BETA-TIP, Zm00001e007523 | tonoplast intrinsic protein (TIP) | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e023039_P001 | PIP2B, PIP2;2,... | plasma membrane intrinsic protein (PIP) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e039086_P002 | ALPHA-TIP,... | tonoplast intrinsic protein (TIP) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0015267 | channel activity | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000425 | MIP | 15 | 236 |
No external refs found! |