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  5. Ore_g09811

Ore_g09811 (LRS1)


Aliases : LRS1

Description : substrate adaptor of CUL4-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0002511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g09811

Target Alias Description ECC score Gene Family Method Actions
AT3G05090 LRS1 Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g117310 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Aev_g33389 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Als_g58023 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene58195.t1 LRS1, Aspi01Gene58195 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58196.t1 LRS1, Aspi01Gene58196 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cba_g23051 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.06G068400.1 LRS1, Ceric.06G068400 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ceric.33G020800.1 LRS1, Ceric.33G020800 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dac_g11508 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Dcu_g03095 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
Ehy_g07063 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
GSVIVT01021896001 LRS1 Dynein assembly factor with WDR repeat domains 1... 0.05 OrthoFinder output from all 47 species
Gb_30748 LRS1 Dynein assembly factor with WDR repeat domains 1... 0.04 OrthoFinder output from all 47 species
MA_555156g0010 LRS1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g13261 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pir_g01037 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pp3c1_36050V3.1 LRS1, Pp3c1_36050 Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g01311 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018560 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Smo139346 LRS1 Dynein assembly factor with WDR repeat domains 1... 0.04 OrthoFinder output from all 47 species
Solyc01g098090.3.1 LRS1, Solyc01g098090 Dynein assembly factor with WDR repeat domains 1... 0.05 OrthoFinder output from all 47 species
Tin_g05212 LRS1 substrate adaptor of CUL4-based E3 ubiquiTin ligase... 0.03 OrthoFinder output from all 47 species
Zm00001e018453_P003 LRS1, Zm00001e018453 Dynein assembly factor with WDR repeat domains 1... 0.07 OrthoFinder output from all 47 species
Zm00001e039445_P001 LRS1, Zm00001e039445 Dynein assembly factor with WDR repeat domains 1... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR021772 WDR48/Bun107 618 758
IPR001680 WD40_repeat 118 156
IPR001680 WD40_repeat 218 249
IPR001680 WD40_repeat 78 112
IPR001680 WD40_repeat 33 69
IPR001680 WD40_repeat 254 291
No external refs found!