Aliases : ATCOL5, COL5
Description : floral promoter *(CONSTANS) & original description: none
Gene families : OG0001141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001141_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ore_g09426 | |
Cluster | HCCA: Cluster_60 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00111p00022140 | ATCOL5, COL5,... | No description available | 0.03 | OrthoFinder output from all 47 species | |
Cba_g10222 | ATCOL5, COL5 | floral promoter *(CONSTANS) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g39710.1 | ATCOL5, COL5,... | transcription factor (BBX-CO) | 0.02 | OrthoFinder output from all 47 species | |
Pir_g22158 | ATCOL5, COL5 | floral promoter *(CONSTANS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g10567 | COL1, ATCOL1 | floral promoter *(CONSTANS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0006.g002977 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: CDS=1-1206 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0011.g005340 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: CDS=210-1442 | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g089500.4.1 | COL1, ATCOL1,... | transcription factor (BBX-CO) | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g089520.2.1 | COL2, ATCOL2,... | transcription factor (BBX-CO) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e039922_P001 | COL3, ATCOL3,... | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000145 | exocyst | IEP | HCCA |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
MF | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006887 | exocytosis | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0015267 | channel activity | IEP | HCCA |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
BP | GO:0032940 | secretion by cell | IEP | HCCA |
MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
BP | GO:0046903 | secretion | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
BP | GO:0072488 | ammonium transmembrane transport | IEP | HCCA |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
BP | GO:0140352 | export from cell | IEP | HCCA |
MF | GO:1901981 | phosphatidylinositol phosphate binding | IEP | HCCA |
MF | GO:1902936 | phosphatidylinositol bisphosphate binding | IEP | HCCA |
No external refs found! |