Ore_g08643

Description : chaperone *(Hsp60) & original description: none

Gene families : OG0000688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000688_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g08643
Cluster	HCCA: Cluster_108

Target	Alias	Description	ECC score	Gene Family Method
AT2G28000	CH-CPN60A, CPN60A, SLP	chaperonin-60alpha	0.02	OrthoFinder output from all 47 species
AT5G18820	EMB3007	TCP-1/cpn60 chaperonin family protein	0.03	OrthoFinder output from all 47 species
Adi_g013083	No alias	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g114645	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g02236	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g10775	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g02895	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene11836.t1	CH-CPN60A,...	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.10G077900.1	CH-CPN60A,...	chaperone *(Hsp60) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.34G041900.1	CPN60B, LEN1,...	chaperone *(Hsp60) & original description:...	0.02	OrthoFinder output from all 47 species
Dde_g03882	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g37829	No alias	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01010149001	No alias	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
GSVIVT01012098001	EMB3007	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
Gb_25193	No alias	RuBisCO large subunit-binding protein subunit beta,...	0.05	OrthoFinder output from all 47 species
MA_10436772g0010	CH-CPN60A, CPN60A, SLP	chaperone (Hsp60)	0.03	OrthoFinder output from all 47 species
MA_587689g0010	CH-CPN60A, CPN60A, SLP	RuBisCO large subunit-binding protein subunit alpha...	0.02	OrthoFinder output from all 47 species
MA_97627g0010	No alias	Chaperonin 60 subunit beta 2, chloroplastic...	0.02	OrthoFinder output from all 47 species
Msp_g06450	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g15384	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g19949	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c24_12180V3.1	CH-CPN60A,...	chaperonin-60alpha	0.01	OrthoFinder output from all 47 species
Sam_g12248	No alias	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g39492	No alias	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g09931	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g38972	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g54235	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
BP	GO:0006275	regulation of DNA replication	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	99	602

External Links

No external refs found!

Ore_g08643

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation