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Aliases : HUB2
Description : E3 ubiquitin ligase *(HUB) & original description: none
Gene families : OG0001584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001584_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g08622 | |
| Cluster | HCCA: Cluster_98 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00181230 | HUB2,... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G44950 | RDO4, HUB1 | histone mono-ubiquitination 1 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g104160 | RDO4, HUB1 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g20568 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g09718 | RDO4, HUB1 | E3 ubiquitin ligase *(HUB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene01624.t1 | HUB2, Aspi01Gene01624 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G031800.1 | RDO4, HUB1,... | E3 ubiquitin ligase *(HUB) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.21G031900.1 | HUB2, Ceric.21G031900 | E3 ubiquitin ligase *(HUB) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Cre14.g625802 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g04109 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g05007 | RDO4, HUB1 | E3 ubiquitin ligase *(HUB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_15023 | HUB2 | RING-HC-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| Gb_28646 | HUB2 | RING-HC-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Len_g08188 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10430809g0020 | HUB2 | RING-HC-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| Mp6g03540.1 | RDO4, HUB1 | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g06195 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g006040.3.1 | HUB2, Solyc01g006040 | RING-HC-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g013370.3.1 | RDO4, HUB1,... | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g08099 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06090 | HUB2 | E3 ubiquiTin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
| BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
| CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015297 | antiporter activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |