Aliases : VAP27, VAP27-1, (AT)VAP, VAP
Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface & original description: none
Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g080054 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
Als_g37439 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01005720001 | No alias | Vesicle-associated protein 2-1 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g30950.1 | VAP27-2, LOC_Os05g30950 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g10766 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
Mp3g04340.1 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g02524 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000535 | MSP_dom | 6 | 110 |
No external refs found! |