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Description : BBX class-IV transcription factor & original description: none
Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g07843 | |
| Cluster | HCCA: Cluster_140 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aob_g06573 | LZF1, STH3, DBB3 | BBX class-IV transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g11974 | LZF1, STH3, DBB3 | BBX class-IV transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene62651.t1 | Aspi01Gene62651 | BBX class-IV transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g009705 | No alias | BBX class-IV transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0185.g056620 | STO | BBX class-IV transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g41560.2 | STO, LOC_Os04g41560 | transcription factor (BBX-DBB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g35880.1 | LOC_Os09g35880 | transcription factor (BBX-DBB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g10660.1 | LZF1, STH3,... | transcription factor (BBX-DBB) | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g31497 | No alias | BBX class-IV transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e007720_P001 | STO, Zm00001e007720 | transcription factor (BBX-DBB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e010221_P001 | Zm00001e010221 | transcription factor (BBX-DBB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e022915_P001 | STO, Zm00001e022915 | transcription factor (BBX-DBB) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| BP | GO:0010206 | photosystem II repair | IEP | HCCA |
| BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0030091 | protein repair | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000315 | Znf_B-box | 54 | 92 |
| No external refs found! |