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  5. Ore_g07401

Ore_g07401 (GCH, ATGCH, RFD1, ATRIBA1)


Aliases : GCH, ATGCH, RFD1, ATRIBA1

Description : EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & original description: none


Gene families : OG0001684 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001684_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g07401
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00210700 GCH, ATGCH,... Coenzyme metabolism.FMN/FAD biosynthesis.bifunctional... 0.03 OrthoFinder output from all 47 species
AT5G59750 No alias DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II 0.03 OrthoFinder output from all 47 species
Adi_g013021 GCH, ATGCH, RFD1, ATRIBA1 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000888 GCH, ATGCH, RFD1, ATRIBA1 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Ceric.28G032800.1 GCH, ATGCH,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
GSVIVT01003433001 GCH, ATGCH, RFD1, ATRIBA1 Coenzyme metabolism.FMN/FAD biosynthesis.bifunctional... 0.04 OrthoFinder output from all 47 species
GSVIVT01025042001 No alias Monofunctional riboflavin biosynthesis protein RIBA 3,... 0.02 OrthoFinder output from all 47 species
LOC_Os08g37605.1 GCH, ATGCH,... bifunctional GTP cyclohydrolase II (RibA) and DHBP... 0.04 OrthoFinder output from all 47 species
Nbi_g04325 GCH, ATGCH, RFD1, ATRIBA1 EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.04 OrthoFinder output from all 47 species
Solyc11g010300.2.1 GCH, ATGCH,... bifunctional GTP cyclohydrolase II (RibA) and DHBP... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEA Interproscan
BP GO:0009231 riboflavin biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000422 DHBP_synthase_RibB 140 333
IPR032677 GTP_cyclohydro_II 343 509
No external refs found!