Aliases : HTA6
Description : histone *(H2A) & original description: none
Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00057p00215390 | HTA6,... | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
AT5G27670 | HTA7 | histone H2A 7 | 0.03 | OrthoFinder output from all 47 species | |
Aob_g33311 | RAT5, HTA1, ATHTA1 | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene06356.t1 | HTA6, Aspi01Gene06356 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene41901.t1 | RAT5, HTA1,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene48040.t1 | HTA7, Aspi01Gene48040 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0154.g053563 | RAT5, HTA1, ATHTA1 | histone *(H2A) & original description: CDS=1-702 | 0.03 | OrthoFinder output from all 47 species | |
Ceric.26G005600.1 | GAMMA-H2AX,... | histone *(H2A) & original description: pacid=50599432... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.26G005800.1 | GAMMA-H2AX,... | histone *(H2A) & original description: pacid=50599346... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g34896 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g12386 | HTA6 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g41140 | HTA2 | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Len_g03984 | HTA7 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g17428 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_191819g0010 | HTA2 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
MA_9379473g0010 | HTA2 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g09403 | HTA7 | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g11307 | HTA10 | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g29875 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g05880 | HTA6 | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g10950 | HTA6 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g43588 | HTA7 | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0127.g021828 | GAMMA-H2AX,... | histone *(H2A) & original description: CDS=106-513 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0210.g025887 | GAMMA-H2AX,... | histone *(H2A) & original description: CDS=1-531 | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004615 | phosphomannomutase activity | IEP | HCCA |
BP | GO:0009225 | nucleotide-sugar metabolic process | IEP | HCCA |
BP | GO:0009226 | nucleotide-sugar biosynthetic process | IEP | HCCA |
BP | GO:0009298 | GDP-mannose biosynthetic process | IEP | HCCA |
BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
BP | GO:0009725 | response to hormone | IEP | HCCA |
BP | GO:0009733 | response to auxin | IEP | HCCA |
BP | GO:0010033 | response to organic substance | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0019673 | GDP-mannose metabolic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0042221 | response to chemical | IEP | HCCA |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
No external refs found! |