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  5. Ore_g07074

Ore_g07074


Description : TCP-type transcription factor & original description: none


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g07074
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AT1G72010 No alias TCP family transcription factor 0.03 OrthoFinder output from all 47 species
AT2G45680 No alias TCP family transcription factor 0.03 OrthoFinder output from all 47 species
AT3G47620 AtTCP14, TCP14 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.04 OrthoFinder output from all 47 species
Adi_g007407 AT-TCP20, TCP20,... circAdian clock activation factor *(TCP20) & original... 0.04 OrthoFinder output from all 47 species
Adi_g086308 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03271 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07321 No alias TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene65051.t1 AT-TCP20, TCP20,... circadian clock activation factor *(TCP20) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene72040.t1 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19331 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09171 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026145001 No alias Multi-process regulation.circadian clock.morning element... 0.03 OrthoFinder output from all 47 species
LOC_Os01g69980.1 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.03 OrthoFinder output from all 47 species
MA_81710g0010 No alias transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Mp7g09490.1 No alias transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Msp_g10117 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24235 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00471 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02433 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06948 AT-TCP20, TCP20,... circadian clock activation factor *(TCP20) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g13050 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g27632 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013125 AtTCP14, TCP14 TCP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016510 No alias TCP-type transcription factor & original description: CDS=1-2211 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0175.g024570 No alias TCP-type transcription factor & original description: CDS=1-1014 0.02 OrthoFinder output from all 47 species
Smo438214 No alias RNA biosynthesis.transcriptional activation.TCP... 0.07 OrthoFinder output from all 47 species
Solyc03g006800.1.1 Solyc03g006800 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc05g007420.2.1 Solyc05g007420 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e003744_P001 Zm00001e003744 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e015209_P001 Zm00001e015209 transcription factor (TCP). CHE circadian clock repression factor 0.03 OrthoFinder output from all 47 species
Zm00001e016271_P001 Zm00001e016271 transcription factor (TCP). CHE circadian clock repression factor 0.03 OrthoFinder output from all 47 species
Zm00001e018800_P001 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.03 OrthoFinder output from all 47 species
Zm00001e028426_P001 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008800 beta-lactamase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides IEP HCCA
BP GO:0016999 antibiotic metabolic process IEP HCCA
BP GO:0017001 antibiotic catabolic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0030653 beta-lactam antibiotic metabolic process IEP HCCA
BP GO:0030655 beta-lactam antibiotic catabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0072338 lactam metabolic process IEP HCCA
BP GO:0072340 lactam catabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 113 221
No external refs found!