Ore_g06538 (ATPUB45, PUB45)

Aliases : ATPUB45, PUB45

Description : E3 ubiquitin ligase & original description: none

Gene families : OG0002832 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002832_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g06538
Cluster	HCCA: Cluster_106

Target	Alias	Description	ECC score	Gene Family Method
Adi_g124686	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g04833	ATPUB45, PUB45	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g62287	ATPUB45, PUB45	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene72640.t1	ATPUB45, PUB45,...	E3 ubiquitin ligase & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.08G047000.1	ATPUB45, PUB45,...	E3 ubiquitin ligase & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g07545	ATPUB45, PUB45	E3 ubiquitin ligase & original description: none	0.05	OrthoFinder output from all 47 species
Lfl_g10053	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g02310	ATPUB45, PUB45	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g14419	ATPUB45, PUB45	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006486	protein glycosylation	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0008373	sialyltransferase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	284	352

External Links

No external refs found!