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  5. Ore_g06523

Ore_g06523


Description : D-arabinose-5-phosphate isomerase & original description: none


Gene families : OG0006389 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006389_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g06523
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Als_g27664 No alias D-arabinose-5-phosphate isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05351 No alias D-arabinose-5-phosphate isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05459 No alias D-arabinose-5-phosphate isomerase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028350001 No alias Cell wall.pectin.rhamnogalacturonan... 0.03 OrthoFinder output from all 47 species
Ppi_g53092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19861 No alias D-arabinose-5-phosphate isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g01715 No alias D-arabinose-5-phosphate isomerase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0097367 carbohydrate derivative binding IEA Interproscan
BP GO:1901135 carbohydrate derivative metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001347 SIS_dom 66 190
IPR000644 CBS_dom 288 343
IPR000644 CBS_dom 220 277
No external refs found!