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  5. Ore_g06310

Ore_g06310 (CHMP1A, VPS46.2)


Aliases : CHMP1A, VPS46.2

Description : associated protein of ESCRT-III complex *(VPS46/CHMP1) & original description: none


Gene families : OG0001221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g06310

Target Alias Description ECC score Gene Family Method Actions
AT1G73030 CHMP1A, VPS46.2 SNF7 family protein 0.02 OrthoFinder output from all 47 species
Adi_g110995 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.02 OrthoFinder output from all 47 species
Ala_g00917 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.02 OrthoFinder output from all 47 species
Cba_g53004 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.02 OrthoFinder output from all 47 species
Cre03.g188500 CHMP1A, VPS46.2 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
Dac_g01964 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.02 OrthoFinder output from all 47 species
Mp5g17770.1 CHMP1B, VPS46.1 VPS46/CHMP1 associated protein of ESCRT-III complex 0.03 OrthoFinder output from all 47 species
Ppi_g16522 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.02 OrthoFinder output from all 47 species
Sam_g06815 No alias associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.03 OrthoFinder output from all 47 species
Smo233036 CHMP1A, VPS46.2 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
Spa_g15038 CHMP1A, VPS46.2 associated protein of ESCRT-III complex *(VPS46/CHMP1) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0008430 selenium binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 14 176
No external refs found!